{
"resourceType": "CodeSystem",
"id": "genomicstudy-methodtype",
"meta": {
"lastUpdated": "2023-03-25T23:21:02-05:00",
"profile": [
"http://hl7.org/fhir/StructureDefinition/shareablecodesystem"
]
},
"text": {
"status": "generated",
"div": "<div xmlns=\"http://www.w3.org/1999/xhtml\">\n <p>This code system \n <code>http://hl7.org/fhir/genomicstudy-methodtype</code> defines the following codes:\n </p>\n <table class=\"codes\">\n <tr>\n <td style=\"white-space:nowrap\">\n <b>Code</b>\n </td>\n <td>\n <b>Display</b>\n </td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">biochemical-genetics\n <a name=\"genomicstudy-methodtype-biochemical-genetics\"> </a>\n </td>\n <td>Biochemical Genetics</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">cytogenetics\n <a name=\"genomicstudy-methodtype-cytogenetics\"> </a>\n </td>\n <td>Cytogenetics</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">molecular-genetics\n <a name=\"genomicstudy-methodtype-molecular-genetics\"> </a>\n </td>\n <td>Molecular Genetics</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">analyte\n <a name=\"genomicstudy-methodtype-analyte\"> </a>\n </td>\n <td>Analyte</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">chromosome-breakage-studies\n <a name=\"genomicstudy-methodtype-chromosome-breakage-studies\"> </a>\n </td>\n <td>Chromosome breakage studies</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">deletion-duplication-analysis\n <a name=\"genomicstudy-methodtype-deletion-duplication-analysis\"> </a>\n </td>\n <td>Deletion/duplication analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">detection-of-homozygosity\n <a name=\"genomicstudy-methodtype-detection-of-homozygosity\"> </a>\n </td>\n <td>Detection of homozygosity</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">enzyme-assay\n <a name=\"genomicstudy-methodtype-enzyme-assay\"> </a>\n </td>\n <td>Enzyme assay</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">fish-interphase\n <a name=\"genomicstudy-methodtype-fish-interphase\"> </a>\n </td>\n <td>FISH-interphase</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">fish-metaphase\n <a name=\"genomicstudy-methodtype-fish-metaphase\"> </a>\n </td>\n <td>FISH-metaphase</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">flow-cytometry\n <a name=\"genomicstudy-methodtype-flow-cytometry\"> </a>\n </td>\n <td>Flow cytometry</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">fish\n <a name=\"genomicstudy-methodtype-fish\"> </a>\n </td>\n <td>Fluorescence in situ hybridization (FISH)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">immunohistochemistry\n <a name=\"genomicstudy-methodtype-immunohistochemistry\"> </a>\n </td>\n <td>Immunohistochemistry</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">karyotyping\n <a name=\"genomicstudy-methodtype-karyotyping\"> </a>\n </td>\n <td>Karyotyping</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">linkage-analysis\n <a name=\"genomicstudy-methodtype-linkage-analysis\"> </a>\n </td>\n <td>Linkage analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">methylation-analysis\n <a name=\"genomicstudy-methodtype-methylation-analysis\"> </a>\n </td>\n <td>Methylation analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">msi\n <a name=\"genomicstudy-methodtype-msi\"> </a>\n </td>\n <td>Microsatellite instability testing (MSI)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">m-fish\n <a name=\"genomicstudy-methodtype-m-fish\"> </a>\n </td>\n <td>Multicolor FISH (M-FISH)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">mutation-scanning-of-select-exons\n <a name=\"genomicstudy-methodtype-mutation-scanning-of-select-exons\"> </a>\n </td>\n <td>Mutation scanning of select exons</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">mutation-scanning-of-the-entire-coding-region\n <a name=\"genomicstudy-methodtype-mutation-scanning-of-the-entire-coding-region\"> </a>\n </td>\n <td>Mutation scanning of the entire coding region</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">protein-analysis\n <a name=\"genomicstudy-methodtype-protein-analysis\"> </a>\n </td>\n <td>Protein analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">protein-expression\n <a name=\"genomicstudy-methodtype-protein-expression\"> </a>\n </td>\n <td>Protein expression</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">rna-analysis\n <a name=\"genomicstudy-methodtype-rna-analysis\"> </a>\n </td>\n <td>RNA analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">sequence-analysis-of-select-exons\n <a name=\"genomicstudy-methodtype-sequence-analysis-of-select-exons\"> </a>\n </td>\n <td>Sequence analysis of select exons</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">sequence-analysis-of-the-entire-coding-region\n <a name=\"genomicstudy-methodtype-sequence-analysis-of-the-entire-coding-region\"> </a>\n </td>\n <td>Sequence analysis of the entire coding region</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">sister-chromatid-exchange\n <a name=\"genomicstudy-methodtype-sister-chromatid-exchange\"> </a>\n </td>\n <td>Sister chromatid exchange</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">targeted-variant-analysis\n <a name=\"genomicstudy-methodtype-targeted-variant-analysis\"> </a>\n </td>\n <td>Targeted variant analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">udp\n <a name=\"genomicstudy-methodtype-udp\"> </a>\n </td>\n <td>Uniparental disomy study (UPD)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">aspe\n <a name=\"genomicstudy-methodtype-aspe\"> </a>\n </td>\n <td>Allele-specific primer extension (ASPE)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">alternative-splicing-detection\n <a name=\"genomicstudy-methodtype-alternative-splicing-detection\"> </a>\n </td>\n <td>Alternative splicing detection</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">bi-directional-sanger-sequence-analysis\n <a name=\"genomicstudy-methodtype-bi-directional-sanger-sequence-analysis\"> </a>\n </td>\n <td>Bi-directional Sanger Sequence Analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">c-banding\n <a name=\"genomicstudy-methodtype-c-banding\"> </a>\n </td>\n <td>C-banding</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">cia\n <a name=\"genomicstudy-methodtype-cia\"> </a>\n </td>\n <td>Chemiluminescent Immunoassay (CIA)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">chromatin-immunoprecipitation-on-chip\n <a name=\"genomicstudy-methodtype-chromatin-immunoprecipitation-on-chip\"> </a>\n </td>\n <td>Chromatin Immunoprecipitation on ChIP</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">comparative-genomic-hybridization\n <a name=\"genomicstudy-methodtype-comparative-genomic-hybridization\"> </a>\n </td>\n <td>Comparative Genomic Hybridization</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">damid\n <a name=\"genomicstudy-methodtype-damid\"> </a>\n </td>\n <td>DamID</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">digital-virtual-karyotyping\n <a name=\"genomicstudy-methodtype-digital-virtual-karyotyping\"> </a>\n </td>\n <td>Digital / Virtual karyotyping</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">digital-microfluidic-microspheres\n <a name=\"genomicstudy-methodtype-digital-microfluidic-microspheres\"> </a>\n </td>\n <td>Digital microfluidic microspheres</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">enzymatic-levels\n <a name=\"genomicstudy-methodtype-enzymatic-levels\"> </a>\n </td>\n <td>Enzymatic levels</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">enzyme-activity\n <a name=\"genomicstudy-methodtype-enzyme-activity\"> </a>\n </td>\n <td>Enzyme activity</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">elisa\n <a name=\"genomicstudy-methodtype-elisa\"> </a>\n </td>\n <td>Enzyme-Linked Immunosorbent Assays (ELISA)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">fluorometry\n <a name=\"genomicstudy-methodtype-fluorometry\"> </a>\n </td>\n <td>Fluorometry</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">fusion-genes-microarrays\n <a name=\"genomicstudy-methodtype-fusion-genes-microarrays\"> </a>\n </td>\n <td>Fusion genes microarrays</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">g-banding\n <a name=\"genomicstudy-methodtype-g-banding\"> </a>\n </td>\n <td>G-banding</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">gc-ms\n <a name=\"genomicstudy-methodtype-gc-ms\"> </a>\n </td>\n <td>Gas chromatography–mass spectrometry (GC-MS)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">gene-expression-profiling\n <a name=\"genomicstudy-methodtype-gene-expression-profiling\"> </a>\n </td>\n <td>Gene expression profiling</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">gene-id\n <a name=\"genomicstudy-methodtype-gene-id\"> </a>\n </td>\n <td>GeneID</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">gold-nanoparticle-probe-technology\n <a name=\"genomicstudy-methodtype-gold-nanoparticle-probe-technology\"> </a>\n </td>\n <td>Gold nanoparticle probe technology</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">hplc\n <a name=\"genomicstudy-methodtype-hplc\"> </a>\n </td>\n <td>High-performance liquid chromatography (HPLC)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">lc-ms\n <a name=\"genomicstudy-methodtype-lc-ms\"> </a>\n </td>\n <td>Liquid chromatography mass spectrometry (LC-MS)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">lc-ms-ms\n <a name=\"genomicstudy-methodtype-lc-ms-ms\"> </a>\n </td>\n <td>Liquid chromatography-tandem mass spectrometry (LC-MS/MS)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">metabolite-levels\n <a name=\"genomicstudy-methodtype-metabolite-levels\"> </a>\n </td>\n <td>Metabolite levels</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">methylation-specific-pcr\n <a name=\"genomicstudy-methodtype-methylation-specific-pcr\"> </a>\n </td>\n <td>Methylation-specific PCR</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">microarray\n <a name=\"genomicstudy-methodtype-microarray\"> </a>\n </td>\n <td>Microarray</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">mlpa\n <a name=\"genomicstudy-methodtype-mlpa\"> </a>\n </td>\n <td>Multiplex Ligation-dependent Probe Amplification (MLPA)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">ngs-mps\n <a name=\"genomicstudy-methodtype-ngs-mps\"> </a>\n </td>\n <td>Next-Generation (NGS)/Massively parallel sequencing (MPS)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">ola\n <a name=\"genomicstudy-methodtype-ola\"> </a>\n </td>\n <td>Oligonucleotide Ligation Assay (OLA)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">oligonucleotide-hybridization-based-dna-sequencing\n <a name=\"genomicstudy-methodtype-oligonucleotide-hybridization-based-dna-sequencing\"> </a>\n </td>\n <td>Oligonucleotide hybridization-based DNA sequencing</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">other\n <a name=\"genomicstudy-methodtype-other\"> </a>\n </td>\n <td>Other</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">pcr\n <a name=\"genomicstudy-methodtype-pcr\"> </a>\n </td>\n <td>PCR</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">pcr-with-allele-specific-hybridization\n <a name=\"genomicstudy-methodtype-pcr-with-allele-specific-hybridization\"> </a>\n </td>\n <td>PCR with allele specific hybridization</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">pcr-rflp-with-southern-hybridization\n <a name=\"genomicstudy-methodtype-pcr-rflp-with-southern-hybridization\"> </a>\n </td>\n <td>PCR-RFLP with Southern hybridization</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">protein-truncation-test\n <a name=\"genomicstudy-methodtype-protein-truncation-test\"> </a>\n </td>\n <td>Protein truncation test</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">pyrosequencing\n <a name=\"genomicstudy-methodtype-pyrosequencing\"> </a>\n </td>\n <td>Pyrosequencing</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">q-banding\n <a name=\"genomicstudy-methodtype-q-banding\"> </a>\n </td>\n <td>Q-banding</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">qpcr\n <a name=\"genomicstudy-methodtype-qpcr\"> </a>\n </td>\n <td>Quantitative PCR (qPCR)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">r-banding\n <a name=\"genomicstudy-methodtype-r-banding\"> </a>\n </td>\n <td>R-banding</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">rflp\n <a name=\"genomicstudy-methodtype-rflp\"> </a>\n </td>\n <td>RFLP</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">rt-lamp\n <a name=\"genomicstudy-methodtype-rt-lamp\"> </a>\n </td>\n <td>RT-LAMP</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">rt-pcr\n <a name=\"genomicstudy-methodtype-rt-pcr\"> </a>\n </td>\n <td>RT-PCR</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">rt-pcr-with-gel-analysis\n <a name=\"genomicstudy-methodtype-rt-pcr-with-gel-analysis\"> </a>\n </td>\n <td>RT-PCR with gel analysis</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">rt-qpcr\n <a name=\"genomicstudy-methodtype-rt-qpcr\"> </a>\n </td>\n <td>RT-qPCR</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">snp-detection\n <a name=\"genomicstudy-methodtype-snp-detection\"> </a>\n </td>\n <td>SNP Detection</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">silver-staining\n <a name=\"genomicstudy-methodtype-silver-staining\"> </a>\n </td>\n <td>Silver staining</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">sky\n <a name=\"genomicstudy-methodtype-sky\"> </a>\n </td>\n <td>Spectral karyotyping (SKY)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">t-banding\n <a name=\"genomicstudy-methodtype-t-banding\"> </a>\n </td>\n <td>T-banding</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">ms-ms\n <a name=\"genomicstudy-methodtype-ms-ms\"> </a>\n </td>\n <td>Tandem mass spectrometry (MS/MS)</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">tetra-nucleotide-repeat-by-pcr-or-southern-blot\n <a name=\"genomicstudy-methodtype-tetra-nucleotide-repeat-by-pcr-or-southern-blot\"> </a>\n </td>\n <td>Tetra-nucleotide repeat by PCR or Southern Blot</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">tiling-arrays\n <a name=\"genomicstudy-methodtype-tiling-arrays\"> </a>\n </td>\n <td>Tiling Arrays</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">trinucleotide-repeat-by-pcr-or-southern-blot\n <a name=\"genomicstudy-methodtype-trinucleotide-repeat-by-pcr-or-southern-blot\"> </a>\n </td>\n <td>Trinucleotide repeat by PCR or Southern Blot</td>\n </tr>\n <tr>\n <td style=\"white-space:nowrap\">uni-directional-sanger-sequencing\n <a name=\"genomicstudy-methodtype-uni-directional-sanger-sequencing\"> </a>\n </td>\n <td>Uni-directional Sanger sequencing</td>\n </tr>\n </table>\n </div>"
},
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg",
"valueCode": "cg"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status",
"valueCode": "trial-use"
},
{
"url": "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm",
"valueInteger": 1
}
],
"url": "http://hl7.org/fhir/genomicstudy-methodtype",
"identifier": [
{
"system": "urn:ietf:rfc:3986",
"value": "urn:oid:2.16.840.1.113883.4.642.4.1979"
}
],
"version": "5.0.0",
"name": "GenomicStudyMethodType",
"title": "Genomic Study Method Type",
"status": "active",
"experimental": true,
"date": "2022-08-16T16:49:24-05:00",
"publisher": "HL7 (FHIR Project)",
"contact": [
{
"telecom": [
{
"system": "url",
"value": "http://hl7.org/fhir"
},
{
"system": "email",
"value": "fhir@lists.hl7.org"
}
]
}
],
"description": "The method type of the GenomicStudy analysis. These method types and relevant codes were pulled from [National Library of Medicine-Genetic Testing Registry](https://www.ncbi.nlm.nih.gov/gtr/) (NCBI-GTR) values of describing different testing methods on various levels: [major method category](https://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms/Major_method_category.txt), [method category](https://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms/Method_category.txt), and [primary methodology](https://ftp.ncbi.nlm.nih.gov/pub/GTR/standard_terms/Primary_test_methodology.txt)",
"jurisdiction": [
{
"coding": [
{
"system": "http://unstats.un.org/unsd/methods/m49/m49.htm",
"code": "001",
"display": "World"
}
]
}
],
"caseSensitive": true,
"valueSet": "http://hl7.org/fhir/ValueSet/genomicstudy-methodtype",
"content": "complete",
"concept": [
{
"code": "biochemical-genetics",
"display": "Biochemical Genetics"
},
{
"code": "cytogenetics",
"display": "Cytogenetics"
},
{
"code": "molecular-genetics",
"display": "Molecular Genetics"
},
{
"code": "analyte",
"display": "Analyte"
},
{
"code": "chromosome-breakage-studies",
"display": "Chromosome breakage studies"
},
{
"code": "deletion-duplication-analysis",
"display": "Deletion/duplication analysis"
},
{
"code": "detection-of-homozygosity",
"display": "Detection of homozygosity"
},
{
"code": "enzyme-assay",
"display": "Enzyme assay"
},
{
"code": "fish-interphase",
"display": "FISH-interphase"
},
{
"code": "fish-metaphase",
"display": "FISH-metaphase"
},
{
"code": "flow-cytometry",
"display": "Flow cytometry"
},
{
"code": "fish",
"display": "Fluorescence in situ hybridization (FISH)"
},
{
"code": "immunohistochemistry",
"display": "Immunohistochemistry"
},
{
"code": "karyotyping",
"display": "Karyotyping"
},
{
"code": "linkage-analysis",
"display": "Linkage analysis"
},
{
"code": "methylation-analysis",
"display": "Methylation analysis"
},
{
"code": "msi",
"display": "Microsatellite instability testing (MSI)"
},
{
"code": "m-fish",
"display": "Multicolor FISH (M-FISH)"
},
{
"code": "mutation-scanning-of-select-exons",
"display": "Mutation scanning of select exons"
},
{
"code": "mutation-scanning-of-the-entire-coding-region",
"display": "Mutation scanning of the entire coding region"
},
{
"code": "protein-analysis",
"display": "Protein analysis"
},
{
"code": "protein-expression",
"display": "Protein expression"
},
{
"code": "rna-analysis",
"display": "RNA analysis"
},
{
"code": "sequence-analysis-of-select-exons",
"display": "Sequence analysis of select exons"
},
{
"code": "sequence-analysis-of-the-entire-coding-region",
"display": "Sequence analysis of the entire coding region"
},
{
"code": "sister-chromatid-exchange",
"display": "Sister chromatid exchange"
},
{
"code": "targeted-variant-analysis",
"display": "Targeted variant analysis"
},
{
"code": "udp",
"display": "Uniparental disomy study (UPD)"
},
{
"code": "aspe",
"display": "Allele-specific primer extension (ASPE)"
},
{
"code": "alternative-splicing-detection",
"display": "Alternative splicing detection"
},
{
"code": "bi-directional-sanger-sequence-analysis",
"display": "Bi-directional Sanger Sequence Analysis"
},
{
"code": "c-banding",
"display": "C-banding"
},
{
"code": "cia",
"display": "Chemiluminescent Immunoassay (CIA)"
},
{
"code": "chromatin-immunoprecipitation-on-chip",
"display": "Chromatin Immunoprecipitation on ChIP"
},
{
"code": "comparative-genomic-hybridization",
"display": "Comparative Genomic Hybridization"
},
{
"code": "damid",
"display": "DamID"
},
{
"code": "digital-virtual-karyotyping",
"display": "Digital / Virtual karyotyping"
},
{
"code": "digital-microfluidic-microspheres",
"display": "Digital microfluidic microspheres"
},
{
"code": "enzymatic-levels",
"display": "Enzymatic levels"
},
{
"code": "enzyme-activity",
"display": "Enzyme activity"
},
{
"code": "elisa",
"display": "Enzyme-Linked Immunosorbent Assays (ELISA)"
},
{
"code": "fluorometry",
"display": "Fluorometry"
},
{
"code": "fusion-genes-microarrays",
"display": "Fusion genes microarrays"
},
{
"code": "g-banding",
"display": "G-banding"
},
{
"code": "gc-ms",
"display": "Gas chromatography–mass spectrometry (GC-MS)"
},
{
"code": "gene-expression-profiling",
"display": "Gene expression profiling"
},
{
"code": "gene-id",
"display": "GeneID"
},
{
"code": "gold-nanoparticle-probe-technology",
"display": "Gold nanoparticle probe technology"
},
{
"code": "hplc",
"display": "High-performance liquid chromatography (HPLC)"
},
{
"code": "lc-ms",
"display": "Liquid chromatography mass spectrometry (LC-MS)"
},
{
"code": "lc-ms-ms",
"display": "Liquid chromatography-tandem mass spectrometry (LC-MS/MS)"
},
{
"code": "metabolite-levels",
"display": "Metabolite levels"
},
{
"code": "methylation-specific-pcr",
"display": "Methylation-specific PCR"
},
{
"code": "microarray",
"display": "Microarray"
},
{
"code": "mlpa",
"display": "Multiplex Ligation-dependent Probe Amplification (MLPA)"
},
{
"code": "ngs-mps",
"display": "Next-Generation (NGS)/Massively parallel sequencing (MPS)"
},
{
"code": "ola",
"display": "Oligonucleotide Ligation Assay (OLA)"
},
{
"code": "oligonucleotide-hybridization-based-dna-sequencing",
"display": "Oligonucleotide hybridization-based DNA sequencing"
},
{
"code": "other",
"display": "Other"
},
{
"code": "pcr",
"display": "PCR"
},
{
"code": "pcr-with-allele-specific-hybridization",
"display": "PCR with allele specific hybridization"
},
{
"code": "pcr-rflp-with-southern-hybridization",
"display": "PCR-RFLP with Southern hybridization"
},
{
"code": "protein-truncation-test",
"display": "Protein truncation test"
},
{
"code": "pyrosequencing",
"display": "Pyrosequencing"
},
{
"code": "q-banding",
"display": "Q-banding"
},
{
"code": "qpcr",
"display": "Quantitative PCR (qPCR)"
},
{
"code": "r-banding",
"display": "R-banding"
},
{
"code": "rflp",
"display": "RFLP"
},
{
"code": "rt-lamp",
"display": "RT-LAMP"
},
{
"code": "rt-pcr",
"display": "RT-PCR"
},
{
"code": "rt-pcr-with-gel-analysis",
"display": "RT-PCR with gel analysis"
},
{
"code": "rt-qpcr",
"display": "RT-qPCR"
},
{
"code": "snp-detection",
"display": "SNP Detection"
},
{
"code": "silver-staining",
"display": "Silver staining"
},
{
"code": "sky",
"display": "Spectral karyotyping (SKY)"
},
{
"code": "t-banding",
"display": "T-banding"
},
{
"code": "ms-ms",
"display": "Tandem mass spectrometry (MS/MS)"
},
{
"code": "tetra-nucleotide-repeat-by-pcr-or-southern-blot",
"display": "Tetra-nucleotide repeat by PCR or Southern Blot"
},
{
"code": "tiling-arrays",
"display": "Tiling Arrays"
},
{
"code": "trinucleotide-repeat-by-pcr-or-southern-blot",
"display": "Trinucleotide repeat by PCR or Southern Blot"
},
{
"code": "uni-directional-sanger-sequencing",
"display": "Uni-directional Sanger sequencing"
}
]
}
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TX: CodeSystem genomicstudy-methodtype